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  5. Dcu_g02518

Dcu_g02518


Description : translation initiation factor *(IF-3) & original description: none


Gene families : OG0001945 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001945_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g02518
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00197680 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
AMTR_s00137p00042790 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.07 OrthoFinder output from all 47 species
Adi_g025876 No alias translation initiation factor *(IF-3) & original... 0.07 OrthoFinder output from all 47 species
Adi_g102476 No alias translation initiation factor *(IF-3) & original... 0.03 OrthoFinder output from all 47 species
Aev_g11375 No alias translation initiation factor *(IF-3) & original... 0.05 OrthoFinder output from all 47 species
Ala_g01530 No alias translation initiation factor *(IF-3) & original... 0.11 OrthoFinder output from all 47 species
Als_g00759 No alias translation initiation factor *(IF-3) & original... 0.08 OrthoFinder output from all 47 species
Aop_g14624 No alias translation initiation factor *(IF-3) & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0095.g043623 No alias translation initiation factor *(IF-3) & original... 0.02 OrthoFinder output from all 47 species
Cba_g03761 No alias translation initiation factor *(IF-3) & original... 0.05 OrthoFinder output from all 47 species
Cre01.g001550 No alias Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
Dde_g10882 No alias translation initiation factor *(IF-3) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g07464 No alias translation initiation factor *(IF-3) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01023642001 No alias Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
LOC_Os02g55120.1 LOC_Os02g55120 IF-3 translation initiation factor 0.04 OrthoFinder output from all 47 species
Len_g15141 No alias translation initiation factor *(IF-3) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g37528 No alias translation initiation factor *(IF-3) & original... 0.11 OrthoFinder output from all 47 species
MA_18402g0010 No alias Translation initiation factor IF3-2, chloroplastic... 0.03 OrthoFinder output from all 47 species
Mp4g21530.1 No alias IF-3 translation initiation factor 0.02 OrthoFinder output from all 47 species
Msp_g11764 No alias translation initiation factor *(IF-3) & original... 0.05 OrthoFinder output from all 47 species
Ore_g07395 No alias translation initiation factor *(IF-3) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g10213 No alias translation initiation factor *(IF-3) & original... 0.02 OrthoFinder output from all 47 species
Pp3c14_5800V3.1 Pp3c14_5800 Translation initiation factor 3 protein 0.02 OrthoFinder output from all 47 species
Ppi_g00723 No alias translation initiation factor *(IF-3) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0113.g020863 No alias translation initiation factor *(IF-3) & original... 0.03 OrthoFinder output from all 47 species
Sam_g06858 No alias translation initiation factor *(IF-3) & original... 0.02 OrthoFinder output from all 47 species
Sam_g36798 No alias translation initiation factor *(IF-3) & original... 0.02 OrthoFinder output from all 47 species
Sam_g49516 No alias translation initiation factor *(IF-3) & original... 0.02 OrthoFinder output from all 47 species
Solyc07g005830.3.1 Solyc07g005830 IF-3 translation initiation factor 0.03 OrthoFinder output from all 47 species
Spa_g00393 No alias translation initiation factor *(IF-3) & original... 0.06 OrthoFinder output from all 47 species
Zm00001e016109_P001 Zm00001e016109 IF-3 translation initiation factor 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA Interproscan
BP GO:0006413 translational initiation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR019815 Translation_initiation_fac_3_C 166 250
IPR019814 Translation_initiation_fac_3_N 88 156
No external refs found!