Description : pre-mRNA splicing factor *(SF1) & original description: none
Gene families : OG0000568 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000568_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Ala_g07951 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g11258 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cba_g17374 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cba_g27472 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cba_g78771 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os08g01070.2 | LOC_Os08g01070 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Len_g12745 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g04920 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g07459 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g27159 | No alias | pre-mRNA splicing factor *(SF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e008383_P001 | Zm00001e008383 | pre-mRNA splicing factor (SF1) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
CC | GO:0005730 | nucleolus | IEP | HCCA |
BP | GO:0006265 | DNA topological change | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
MF | GO:0008134 | transcription factor binding | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
BP | GO:0051276 | chromosome organization | IEP | HCCA |
BP | GO:0071103 | DNA conformation change | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR032570 | SF1-HH | 75 | 174 |
No external refs found! |