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  5. Dcu_g02248

Dcu_g02248


Description : component *(eS26) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001368 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001368_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g02248
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00042770 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 OrthoFinder output from all 47 species
AT2G40510 No alias Ribosomal protein S26e family protein 0.09 OrthoFinder output from all 47 species
AT2G40590 No alias Ribosomal protein S26e family protein 0.04 OrthoFinder output from all 47 species
AT3G56340 No alias Ribosomal protein S26e family protein 0.06 OrthoFinder output from all 47 species
Adi_g026438 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Adi_g067777 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Aev_g07493 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Als_g26360 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Aop_g17895 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Aop_g30554 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.07 OrthoFinder output from all 47 species
Aop_g67998 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011486 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.15 OrthoFinder output from all 47 species
Azfi_s0038.g026316 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Cba_g20558 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Ceric.21G032100.1 Ceric.21G032100 component *(eS26) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001486.9 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.1 OrthoFinder output from all 47 species
Cre16.g682300 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.23 OrthoFinder output from all 47 species
Dac_g16013 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Dac_g27155 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Dac_g33608 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.15 OrthoFinder output from all 47 species
Dcu_g00870 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Ehy_g01928 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.07 OrthoFinder output from all 47 species
GSVIVT01024576001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
GSVIVT01032696001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.24 OrthoFinder output from all 47 species
Gb_00995 No alias component RPS26 of SSU proteome 0.07 OrthoFinder output from all 47 species
Gb_00996 No alias component RPS26 of SSU proteome 0.03 OrthoFinder output from all 47 species
LOC_Os01g60790.1 LOC_Os01g60790 component RPS26 of SSU proteome 0.13 OrthoFinder output from all 47 species
LOC_Os05g39960.1 LOC_Os05g39960 component RPS26 of SSU proteome 0.18 OrthoFinder output from all 47 species
Len_g00840 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Lfl_g15449 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
MA_114136g0010 No alias component RPS26 of SSU proteome 0.09 OrthoFinder output from all 47 species
MA_74546g0010 No alias component RPS26 of SSU proteome 0.04 OrthoFinder output from all 47 species
Mp2g06210.1 No alias component RPS26 of SSU proteome 0.27 OrthoFinder output from all 47 species
Msp_g34756 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Msp_g40775 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Nbi_g20040 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ore_g04059 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pir_g06425 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pir_g09911 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Pir_g53104 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pp3c16_9210V3.1 Pp3c16_9210 Ribosomal protein S26e family protein 0.07 OrthoFinder output from all 47 species
Pp3c5_16070V3.1 Pp3c5_16070 Ribosomal protein S26e family protein 0.13 OrthoFinder output from all 47 species
Pp3c6_8910V3.1 Pp3c6_8910 Ribosomal protein S26e family protein 0.14 OrthoFinder output from all 47 species
Ppi_g19798 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Ppi_g34120 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Ppi_g42559 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g51963 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g15700 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.11 OrthoFinder output from all 47 species
Sam_g47002 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.15 OrthoFinder output from all 47 species
Sam_g48093 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Smo77589 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.12 OrthoFinder output from all 47 species
Solyc04g008810.3.1 Solyc04g008810 component RPS26 of SSU proteome 0.2 OrthoFinder output from all 47 species
Solyc06g007470.3.1 Solyc06g007470 component RPS26 of SSU proteome 0.04 OrthoFinder output from all 47 species
Spa_g03106 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.07 OrthoFinder output from all 47 species
Spa_g09980 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Spa_g25276 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.08 OrthoFinder output from all 47 species
Spa_g36890 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Tin_g26404 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.08 OrthoFinder output from all 47 species
Zm00001e011780_P001 Zm00001e011780 component RPS26 of SSU proteome 0.15 OrthoFinder output from all 47 species
Zm00001e027298_P001 Zm00001e027298 component RPS26 of SSU proteome 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0008535 respiratory chain complex IV assembly IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP HCCA
BP GO:0033617 mitochondrial cytochrome c oxidase assembly IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR000892 Ribosomal_S26e 1 106
No external refs found!