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Dcu_g01979 (APUM12, PUM12)


Aliases : APUM12, PUM12

Description : not classified & original description: none


Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g01979

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00060p00178160 PUM7, APUM7,... Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT5G56510 APUM12, PUM12 pumilio 12 0.04 OrthoFinder output from all 47 species
Azfi_s0040.g026500 APUM12, PUM12 not classified & original description: CDS=1-2874 0.04 OrthoFinder output from all 47 species
GSVIVT01033396001 APUM12, PUM12 Pumilio homolog 12 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
MA_171998g0010 APUM12, PUM12 Pumilio homolog 12 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_63194g0010 APUM12, PUM12 Pumilio homolog 12 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Pnu_g20896 APUM12, PUM12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03517 APUM12, PUM12 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 640 671
IPR001313 Pumilio_RNA-bd_rpt 823 857
IPR001313 Pumilio_RNA-bd_rpt 865 890
IPR001313 Pumilio_RNA-bd_rpt 716 746
IPR001313 Pumilio_RNA-bd_rpt 604 638
IPR001313 Pumilio_RNA-bd_rpt 789 806
IPR001313 Pumilio_RNA-bd_rpt 678 710
IPR001313 Pumilio_RNA-bd_rpt 751 784
No external refs found!