Dcu_g01959 (POLGAMMA1)

Aliases : POLGAMMA1

Description : DNA polymerase *(POP) & original description: none

Gene families : OG0003071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003071_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g01959
Cluster	HCCA: Cluster_163

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00062p00102370	POLGAMMA2,...	Cell cycle.organelle machineries.DNA replication.DNA...	0.03	OrthoFinder output from all 47 species
AT1G50840	POLGAMMA2	polymerase gamma 2	0.03	OrthoFinder output from all 47 species
Als_g12949	POLGAMMA2	DNA polymerase *(POP) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.10G031600.1	POLGAMMA2,...	DNA polymerase *(POP) & original description:...	0.03	OrthoFinder output from all 47 species
LOC_Os08g07840.1	POLGAMMA2, LOC_Os08g07840	DNA polymerase (POP)	0.02	OrthoFinder output from all 47 species
Nbi_g16045	POLGAMMA2	DNA polymerase *(POP) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e041749_P001	POLGAMMA2, Zm00001e041749	DNA polymerase (POP)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004527	exonuclease activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008408	3'-5' exonuclease activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001098	DNA-dir_DNA_pol_A_palm_dom	879	1061
IPR001098	DNA-dir_DNA_pol_A_palm_dom	729	855
IPR002562	3'-5'_exonuclease_dom	336	505

External Links

No external refs found!