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  5. Dcu_g01884

Dcu_g01884 (ATPRMT6, PRMT6)


Aliases : ATPRMT6, PRMT6

Description : not classified & original description: none


Gene families : OG0001088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g01884

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00239020 ATPRMT11,... Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
AT3G12270 PRMT3, ATPRMT3 protein arginine methyltransferase 3 0.04 OrthoFinder output from all 47 species
AT4G29510 ATPRMT11,... arginine methyltransferase 11 0.04 OrthoFinder output from all 47 species
Aev_g30276 PRMT3, ATPRMT3 ribosomal protein arginine N-methyltransferase *(PRMT3)... 0.03 OrthoFinder output from all 47 species
Aop_g10678 PRMT3, ATPRMT3 ribosomal protein arginine N-methyltransferase *(PRMT3)... 0.03 OrthoFinder output from all 47 species
Azfi_s0371.g067130 ATPRMT6, PRMT6 not classified & original description: CDS=379-1746 0.04 OrthoFinder output from all 47 species
Ceric.05G067400.1 PRMT3, ATPRMT3,... ribosomal protein arginine N-methyltransferase *(PRMT3)... 0.07 OrthoFinder output from all 47 species
Ceric.36G007700.1 ATPRMT11,... histone methylase *(PRMT1) & original description:... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000405.18 ATPRMT11,... Chromatin organisation.histone modifications.histone... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001049.36 PRMT1A, ATPRMT1A Probable protein arginine N-methyltransferase 1.2... 0.02 OrthoFinder output from all 47 species
Cre16.g685900 PRMT3, ATPRMT3 Protein biosynthesis.cytosolic ribosome.ribosome... 0.02 OrthoFinder output from all 47 species
Dde_g04778 ATPRMT11,... histone methylase *(PRMT1) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015236001 ATPRMT11,... Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
GSVIVT01036648001 PRMT3, ATPRMT3 Protein biosynthesis.cytosolic ribosome.ribosome... 0.02 OrthoFinder output from all 47 species
Gb_03001 ATPRMT6, PRMT6 Probable protein arginine N-methyltransferase 6... 0.04 OrthoFinder output from all 47 species
Gb_34867 PRMT3, ATPRMT3 ribosomal protein arginine N-methyltransferase (PRMT3) 0.05 OrthoFinder output from all 47 species
LOC_Os07g44640.1 PRMT3, ATPRMT3,... ribosomal protein arginine N-methyltransferase (PRMT3) 0.05 OrthoFinder output from all 47 species
LOC_Os09g19560.1 ATPRMT11,... histone methylase (PRMT1) 0.09 OrthoFinder output from all 47 species
MA_10436659g0010 ATPRMT6, PRMT6 Probable protein arginine N-methyltransferase 6... 0.02 OrthoFinder output from all 47 species
MA_6268g0020 PRMT3, ATPRMT3 Probable protein arginine N-methyltransferase 3 OS=Oryza... 0.03 OrthoFinder output from all 47 species
Mp5g00320.1 ATPRMT11,... histone methylase (PRMT1) 0.04 OrthoFinder output from all 47 species
Mp5g14740.1 PRMT3, ATPRMT3 ribosomal protein arginine N-methyltransferase (PRMT3) 0.04 OrthoFinder output from all 47 species
Ore_g36048 PRMT3, ATPRMT3 ribosomal protein arginine N-methyltransferase *(PRMT3)... 0.02 OrthoFinder output from all 47 species
Sam_g09560 No alias histone methylase *(PRMT1) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18393 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo95789 PRMT3, ATPRMT3 Protein biosynthesis.cytosolic ribosome.ribosome... 0.07 OrthoFinder output from all 47 species
Solyc01g096550.3.1 PRMT3, ATPRMT3,... ribosomal protein arginine N-methyltransferase (PRMT3) 0.03 OrthoFinder output from all 47 species
Solyc07g032240.3.1 ATPRMT11,... histone methylase (PRMT1) 0.02 OrthoFinder output from all 47 species
Solyc12g008760.3.1 ATPRMT11,... histone methylase (PRMT1) 0.04 OrthoFinder output from all 47 species
Tin_g03299 ATPRMT6, PRMT6 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e033500_P001 PRMT3, ATPRMT3,... ribosomal protein arginine N-methyltransferase (PRMT3) 0.05 OrthoFinder output from all 47 species
Zm00001e033907_P001 ATPRMT11,... histone methylase (PRMT1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0004146 dihydrofolate reductase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006760 folic acid-containing compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0009396 folic acid-containing compound biosynthetic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046653 tetrahydrofolate metabolic process IEP HCCA
BP GO:0046654 tetrahydrofolate biosynthetic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!