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  5. Dcu_g01881

Dcu_g01881


Description : not classified & original description: none


Gene families : OG0001071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g01881

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00027p00248120 evm_27.TU.AmTr_v1... Uncharacterized TPR repeat-containing protein At1g05150... 0.03 OrthoFinder output from all 47 species
Adi_g087050 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08315 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.38G035400.1 Ceric.38G035400 not classified & original description: pacid=50579890... 0.04 OrthoFinder output from all 47 species
Dac_g10427 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02917 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_66164g0010 No alias Uncharacterized TPR repeat-containing protein At2g32450... 0.04 OrthoFinder output from all 47 species
Msp_g08410 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g03238 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g47058 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007314 No alias not classified & original description: CDS=1-2406 0.04 OrthoFinder output from all 47 species
Smo183465 No alias Uncharacterized TPR repeat-containing protein At1g05150... 0.03 OrthoFinder output from all 47 species
Smo440495 No alias Uncharacterized TPR repeat-containing protein At1g05150... 0.02 OrthoFinder output from all 47 species
Spa_g08300 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 13 35
IPR019734 TPR_repeat 388 421
IPR019734 TPR_repeat 281 308
No external refs found!