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  5. Dcu_g01869

Dcu_g01869


Description : ROP-activating protein *(RenGAP) & original description: none


Gene families : OG0001811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001811_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g01869
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00063p00197920 evm_27.TU.AmTr_v1... Rho GTPase-activating protein 7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT5G19390 No alias Rho GTPase activation protein (RhoGAP) with PH domain 0.03 OrthoFinder output from all 47 species
Adi_g057672 No alias ROP-activating protein *(RenGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70602 No alias ROP-activating protein *(RenGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene22388.t1 Aspi01Gene22388 ROP-activating protein *(RenGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72860.t1 Aspi01Gene72860 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0028.g023819 No alias ROP-activating protein *(RenGAP) & original description:... 0.02 OrthoFinder output from all 47 species
Azfi_s0173.g055873 No alias ROP-activating protein *(RenGAP) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.11G041800.1 Ceric.11G041800 ROP-activating protein *(RenGAP) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g09456 No alias ROP-activating protein *(RenGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g00934 No alias ROP-activating protein *(RenGAP) & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01037287001 No alias Rho GTPase-activating protein 7 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os03g11140.1 REN1, LOC_Os03g11140 Rho GTPase-activating protein 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os03g24180.1 LOC_Os03g24180 Rho GTPase-activating protein 7 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os07g46450.1 LOC_Os07g46450 Rho GTPase-activating protein 7 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_42703g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_540526g0010 No alias Rho GTPase-activating protein 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g16703 No alias ROP-activating protein *(RenGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12960 No alias ROP-activating protein *(RenGAP) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g02003 No alias ROP-activating protein *(RenGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g31978 No alias ROP-activating protein *(RenGAP) & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g48662 No alias ROP-activating protein *(RenGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39070 No alias ROP-activating protein *(RenGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Smo442380 No alias Rho GTPase-activating protein 7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc04g076140.3.1 REN1, Solyc04g076140 Rho GTPase-activating protein REN1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g30873 No alias ROP-activating protein *(RenGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e038550_P002 REN1, Zm00001e038550 Rho GTPase-activating protein REN1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000198 RhoGAP_dom 179 323
IPR025757 MIP1_Leuzipper 613 692
IPR001849 PH_domain 22 122
No external refs found!