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  5. Dcu_g01867

Dcu_g01867


Description : subunit gamma of cargo adaptor F-subcomplex & original description: none


Gene families : OG0001172 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0001172_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g01867
Cluster HCCA: Cluster_426

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00069290 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 39 species
Aev_g14556 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 39 species
Aev_g44391 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.07 OrthoFinder output from all 39 species
Ala_g05681 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 39 species
Als_g23314 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 39 species
Aob_g15373 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 39 species
Aop_g06505 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 39 species
Ceric.04G110200.1 Ceric.04G110200 subunit gamma of cargo adaptor F-subcomplex & original... 0.07 OrthoFinder output from all 39 species
Ceric.28G060100.1 Ceric.28G060100 subunit gamma of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 39 species
Dac_g03838 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 39 species
Dde_g05374 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 39 species
Gb_36850 No alias subunit gamma of cargo adaptor F-subcomplex 0.02 OrthoFinder output from all 39 species
Gb_36851 No alias Coatomer subunit gamma-2 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 39 species
Len_g13320 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 39 species
Lfl_g02207 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 39 species
Mp1g05250.1 No alias subunit gamma of cargo adaptor F-subcomplex 0.06 OrthoFinder output from all 39 species
Msp_g24101 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.06 OrthoFinder output from all 39 species
Nbi_g10516 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 39 species
Ore_g06577 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 39 species
Ore_g23100 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Pir_g10430 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 39 species
Pnu_g18446 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 39 species
Ppi_g01355 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 39 species
Smo268757 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 39 species
Spa_g17860 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 39 species
Tin_g11774 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR013040 Coatomer_gsu_app_Ig-like_dom 631 774
IPR032154 Coatomer_g_Cpla 777 890
IPR002553 Clathrin/coatomer_adapt-like_N 33 542
No external refs found!