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  5. Dcu_g01862

Dcu_g01862


Description : regulatory protein *(CMU) of microtubule-dependent CSC insertion & original description: none


Gene families : OG0000703 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000703_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g01862

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00150340 evm_27.TU.AmTr_v1... Protein KINESIN LIGHT CHAIN-RELATED 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aev_g03403 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Aob_g23493 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Aop_g05769 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.05 OrthoFinder output from all 47 species
Dac_g03822 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Ehy_g04935 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.02 OrthoFinder output from all 47 species
Ehy_g16002 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.02 OrthoFinder output from all 47 species
GSVIVT01027175001 No alias Protein KINESIN LIGHT CHAIN-RELATED 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os02g01960.1 LOC_Os02g01960 regulatory protein (CMU) of microtubule-dependent CSC insertion 0.02 OrthoFinder output from all 47 species
LOC_Os02g47880.1 LOC_Os02g47880 regulatory protein (CMU) of microtubule-dependent CSC insertion 0.02 OrthoFinder output from all 47 species
MA_10430767g0010 No alias Protein KINESIN LIGHT CHAIN-RELATED 2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_50635g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_760658g0010 No alias regulatory protein (CMU) of microtubule-dependent CSC insertion 0.04 OrthoFinder output from all 47 species
MA_760658g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g04528 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Ppi_g15413 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008050 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.02 OrthoFinder output from all 47 species
Sam_g19440 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Sam_g19488 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Sam_g26336 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Spa_g04349 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Tin_g11107 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Zm00001e013426_P003 Zm00001e013426 regulatory protein (CMU) of microtubule-dependent CSC insertion 0.02 OrthoFinder output from all 47 species
Zm00001e023340_P002 Zm00001e023340 regulatory protein (CMU) of microtubule-dependent CSC insertion 0.04 OrthoFinder output from all 47 species
Zm00001e025391_P001 Zm00001e025391 regulatory protein (CMU) of microtubule-dependent CSC insertion 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004055 argininosuccinate synthase activity IEP HCCA
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP HCCA
BP GO:0006525 arginine metabolic process IEP HCCA
BP GO:0006526 arginine biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR019734 TPR_repeat 255 283
IPR019734 TPR_repeat 211 236
No external refs found!