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  5. Dcu_g01780

Dcu_g01780


Description : splicing factor *(CFM9) & original description: none


Gene families : OG0001914 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001914_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g01780

Target Alias Description ECC score Gene Family Method Actions
AT4G13070 No alias RNA-binding CRS1 / YhbY (CRM) domain protein 0.04 OrthoFinder output from all 47 species
Ceric.01G126500.1 Ceric.01G126500 splicing factor *(CFM9) & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g12917 No alias splicing factor *(CFM9) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032387001 No alias Uncharacterized CRM domain-containing protein At3g25440,... 0.04 OrthoFinder output from all 47 species
MA_10427237g0020 No alias Uncharacterized CRM domain-containing protein At3g25440,... 0.02 OrthoFinder output from all 47 species
MA_10436523g0010 No alias Uncharacterized CRM domain-containing protein At3g25440,... 0.03 OrthoFinder output from all 47 species
Solyc06g082990.4.1 Solyc06g082990 Uncharacterized CRM domain-containing protein At3g25440,... 0.03 OrthoFinder output from all 47 species
Solyc07g047900.3.1 Solyc07g047900 Uncharacterized CRM domain-containing protein At3g25440,... 0.05 OrthoFinder output from all 47 species
Zm00001e027517_P001 Zm00001e027517 Uncharacterized CRM domain-containing protein At3g25440,... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR001890 RNA-binding_CRM 165 248
No external refs found!