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  5. Dcu_g01706

Dcu_g01706 (HCF101)


Aliases : HCF101

Description : scaffold protein HCF101 of plastidial SUF system transfer phase & original description: none


Gene families : OG0004803 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004803_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g01706

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00142p00060790 HCF101,... Coenzyme metabolism.iron-sulfur cluster assembly... 0.07 OrthoFinder output from all 47 species
AT3G24430 HCF101 ATP binding 0.04 OrthoFinder output from all 47 species
Ala_g13945 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.03 OrthoFinder output from all 47 species
Als_g18429 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.03 OrthoFinder output from all 47 species
Als_g19035 HCF101 protein involved in PS-I assembly *(HCF101) & original... 0.02 OrthoFinder output from all 47 species
Ceric.05G039700.1 HCF101, Ceric.05G039700 scaffold protein HCF101 of plastidial SUF system... 0.03 OrthoFinder output from all 47 species
Ehy_g06869 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.03 OrthoFinder output from all 47 species
GSVIVT01015424001 HCF101 Coenzyme metabolism.iron-sulfur cluster assembly... 0.03 OrthoFinder output from all 47 species
Lfl_g12880 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.03 OrthoFinder output from all 47 species
Ore_g30871 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.02 OrthoFinder output from all 47 species
Ppi_g57975 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.03 OrthoFinder output from all 47 species
Sam_g25149 No alias scaffold protein HCF101 of plastidial SUF system... 0.02 OrthoFinder output from all 47 species
Solyc12g007010.2.1 HCF101, Solyc12g007010 HCF101 protein involved in PS-I assembly. scaffold... 0.05 OrthoFinder output from all 47 species
Zm00001e008773_P004 HCF101, Zm00001e008773 HCF101 protein involved in PS-I assembly. scaffold... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR010376 GBBH-like_N 454 507
IPR033756 YlxH/NBP35 177 413
IPR002744 MIP18-like 82 155
No external refs found!