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  5. Dcu_g01662

Dcu_g01662


Description : not classified & original description: none


Gene families : OG0000185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000185_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g01662

Target Alias Description ECC score Gene Family Method Actions
AT4G18375 No alias RNA-binding KH domain-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g012562 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g074054 HEN4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115536 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04310 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29218 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g62599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0090.g042794 No alias not classified & original description: CDS=151-1857 0.03 OrthoFinder output from all 47 species
Cba_g03276 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g17642 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.14G007100.1 Ceric.14G007100 not classified & original description: pacid=50632910... 0.04 OrthoFinder output from all 47 species
Ceric.14G023600.1 Ceric.14G023600 not classified & original description: pacid=50632924... 0.03 OrthoFinder output from all 47 species
Dac_g02274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09896 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_31686 No alias RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
Len_g19668 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04023 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_20325g0010 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_6622g0010 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ore_g07144 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10011 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06368 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16334 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0108.g020404 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.02 OrthoFinder output from all 47 species
Solyc05g007810.3.1 Solyc05g007810 RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
Solyc12g055780.3.1 Solyc12g055780 RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
Spa_g26299 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g39448 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g02804 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e004486_P005 Zm00001e004486 KH domain-containing protein At4g18375 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e037033_P001 Zm00001e037033 RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 352 402
IPR004088 KH_dom_type_1 609 672
IPR004088 KH_dom_type_1 202 266
IPR004088 KH_dom_type_1 437 502
IPR004088 KH_dom_type_1 51 102
No external refs found!