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  5. Dcu_g01506

Dcu_g01506 (TAF8)


Aliases : TAF8

Description : component *(TAF8) of TFIId basal transcription regulation complex & original description: none


Gene families : OG0002836 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002836_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g01506
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Aev_g02426 TAF8 component *(TAF8) of TFIId basal transcription... 0.08 OrthoFinder output from all 47 species
Ala_g01751 No alias component *(TAF8) of TFIId basal transcription... 0.03 OrthoFinder output from all 47 species
Ceric.23G030000.1 Ceric.23G030000 component *(TAF8) of TFIId basal transcription... 0.03 OrthoFinder output from all 47 species
GSVIVT01032913001 TAF8 RNA biosynthesis.RNA polymerase II-dependent... 0.04 OrthoFinder output from all 47 species
LOC_Os02g47160.1 TAF8, LOC_Os02g47160 component TAF8 of TFIId basal transcription regulation complex 0.03 OrthoFinder output from all 47 species
MA_166792g0010 TAF8 component TAF8 of TFIId basal transcription regulation complex 0.03 OrthoFinder output from all 47 species
Smo229939 TAF8 RNA biosynthesis.RNA polymerase II-dependent... 0.04 OrthoFinder output from all 47 species
Solyc09g008150.3.1 TAF8, Solyc09g008150 component TAF8 of TFIId basal transcription regulation complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR006565 BTP 9 80
IPR019473 TFIID_su8_C 142 190
No external refs found!