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  5. Dcu_g01416

Dcu_g01416


Description : not classified & original description: none


Gene families : OG0001514 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001514_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g01416

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00179100 evm_27.TU.AmTr_v1... Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AMTR_s00045p00194830 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.04 OrthoFinder output from all 47 species
AMTR_s00203p00009790 evm_27.TU.AmTr_v1... Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
AT3G58520 No alias Ubiquitin carboxyl-terminal hydrolase family protein 0.06 OrthoFinder output from all 47 species
Adi_g056854 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g088467 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g27331 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g13520 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g25571 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G112500.1 Ceric.04G112500 not classified & original description: pacid=50632449... 0.04 OrthoFinder output from all 47 species
Ceric.16G075200.1 RPD1, Ceric.16G075200 not classified & original description: pacid=50589258... 0.03 OrthoFinder output from all 47 species
Ceric.24G018700.1 Ceric.24G018700 not classified & original description: pacid=50629155... 0.03 OrthoFinder output from all 47 species
Ceric.39G028700.1 Ceric.39G028700 not classified & original description: pacid=50582453... 0.06 OrthoFinder output from all 47 species
Dac_g12385 RPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23978 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_02172 No alias Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_04492 No alias WTF9 mitochondrial RNA splicing factor 0.05 OrthoFinder output from all 47 species
LOC_Os01g18880.2 LOC_Os01g18880 Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os06g15550.1 LOC_Os06g15550 Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Len_g07210 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07478 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g019970.3.1 Solyc11g019970 no description available(sp|q9zuz6|wtf9_arath : 243.0) 0.04 OrthoFinder output from all 47 species
Spa_g12440 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g31693 RPD1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e006573_P002 Zm00001e006573 Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Zm00001e014695_P001 Zm00001e014695 no description available(sp|q9zuz6|wtf9_arath : 128.0) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR021099 PORR_domain 58 389
No external refs found!