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  5. Dcu_g01138

Dcu_g01138 (LZF1, STH3, DBB3)


Aliases : LZF1, STH3, DBB3

Description : BBX class-IV transcription factor & original description: none


Gene families : OG0000403 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000403_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g01138
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00204180 STO,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AT1G06040 STO B-box zinc finger family protein 0.05 OrthoFinder output from all 47 species
AT1G75540 STH2 salt tolerance homolog2 0.02 OrthoFinder output from all 47 species
AT2G47890 No alias B-box type zinc finger protein with CCT domain 0.02 OrthoFinder output from all 47 species
Als_g28425 No alias BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g11974 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06936 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04332 No alias BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01010794001 STH RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
Lfl_g04007 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06640 No alias BBX class-IV transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g11174 STH BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo271535 STO RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
Solyc06g073180.3.1 STO, Solyc06g073180 transcription factor (BBX-DBB) 0.04 OrthoFinder output from all 47 species
Zm00001e022915_P001 STO, Zm00001e022915 transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEP HCCA
InterPro domains Description Start Stop
IPR000315 Znf_B-box 55 97
No external refs found!