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  5. Dcu_g00902

Dcu_g00902


Description : regulatory component *(RPN11) of 26S proteasome & original description: none


Gene families : OG0003199 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003199_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g00902
Cluster HCCA: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
AT5G23540 No alias Mov34/MPN/PAD-1 family protein 0.05 OrthoFinder output from all 47 species
Adi_g086661 No alias regulatory component *(RPN11) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Aop_g01609 No alias regulatory component *(RPN11) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001542.22 No alias Protein degradation.26S proteasome.regulatory... 0.03 OrthoFinder output from all 47 species
Cre01.g011500 No alias Protein degradation.26S proteasome.regulatory... 0.1 OrthoFinder output from all 47 species
Ehy_g11947 No alias regulatory component *(RPN11) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Gb_24814 No alias regulatory component RPN11 of 26S proteasome 0.03 OrthoFinder output from all 47 species
LOC_Os01g16190.1 LOC_Os01g16190 regulatory component RPN11 of 26S proteasome 0.08 OrthoFinder output from all 47 species
Len_g05256 No alias regulatory component *(RPN11) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Lfl_g00788 No alias regulatory component *(RPN11) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Mp5g01180.1 No alias regulatory component RPN11 of 26S proteasome 0.05 OrthoFinder output from all 47 species
Nbi_g18621 No alias regulatory component *(RPN11) of 26S proteasome &... 0.06 OrthoFinder output from all 47 species
Ore_g19807 No alias regulatory component *(RPN11) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Ppi_g05003 No alias regulatory component *(RPN11) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Sam_g07997 No alias regulatory component *(RPN11) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Sam_g07998 No alias regulatory component *(RPN11) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Solyc04g079200.3.1 Solyc04g079200 regulatory component RPN11 of 26S proteasome 0.08 OrthoFinder output from all 47 species
Spa_g41483 No alias regulatory component *(RPN11) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Tin_g01686 No alias regulatory component *(RPN11) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008233 peptidase activity IEA Interproscan
MF GO:0008237 metallopeptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR024969 Rpn11/EIF3F_C 172 294
IPR000555 JAMM/MPN+_dom 26 137
No external refs found!