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  5. Dcu_g00487

Dcu_g00487


Description : not classified & original description: none


Gene families : OG0000543 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000543_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g00487

Target Alias Description ECC score Gene Family Method Actions
Als_g15941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g37030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67803 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene12674.t1 Aspi01Gene12674 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene58865.t1 Aspi01Gene58865 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58866.t1 Aspi01Gene58866 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G049900.1 Ceric.04G049900 not classified & original description: pacid=50632133... 0.03 OrthoFinder output from all 47 species
Ceric.09G088100.1 Ceric.09G088100 not classified & original description: pacid=50586807... 0.03 OrthoFinder output from all 47 species
Ceric.13G093600.1 Ceric.13G093600 not classified & original description: pacid=50636024... 0.04 OrthoFinder output from all 47 species
Dac_g07235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16494 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g50601 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08114 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g28880 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01001356001 No alias No description available 0.03 OrthoFinder output from all 47 species
MA_158473g0010 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Msp_g23495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34122 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12467 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001904 No alias not classified & original description: CDS=1-351 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0268.g026986 No alias not classified & original description: CDS=193-879 0.03 OrthoFinder output from all 47 species
Spa_g03596 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56441 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e030507_P001 Zm00001e030507 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004126 cytidine deaminase activity IEP HCCA
MF GO:0005201 extracellular matrix structural constituent IEP HCCA
BP GO:0006213 pyrimidine nucleoside metabolic process IEP HCCA
BP GO:0006216 cytidine catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
BP GO:0009119 ribonucleoside metabolic process IEP HCCA
BP GO:0009164 nucleoside catabolic process IEP HCCA
BP GO:0009972 cytidine deamination IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP HCCA
BP GO:0042454 ribonucleoside catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046087 cytidine metabolic process IEP HCCA
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP HCCA
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP HCCA
BP GO:0046135 pyrimidine nucleoside catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072529 pyrimidine-containing compound catabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
BP GO:1901658 glycosyl compound catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!