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  5. AMTR_s00101p00091430

AMTR_s00101p00091430 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00101.68

Description : Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.ALADIN scaffold nucleoporin


Gene families : OG_01_0004325 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004325_tree ,
OG_02_0004827 (LandPlants) Phylogenetic Tree(s): OG_02_0004827_tree ,
OG_03_0005573 (SeedPlants) Phylogenetic Tree(s): OG_03_0005573_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00101p00091430
Cluster HCCA: Cluster_249

Target Alias Description ECC score Gene Family Method Actions
LOC_Os11g03794.1 No alias ALADIN scaffold nucleoporin of nuclear pore complex 0.02 Archaeplastida
Solyc08g016801.1.1 No alias ALADIN scaffold nucleoporin of nuclear pore complex 0.02 Archaeplastida
LOC_Os11g03794.1 No alias ALADIN scaffold nucleoporin of nuclear pore complex 0.02 LandPlants
Solyc08g016801.1.1 No alias ALADIN scaffold nucleoporin of nuclear pore complex 0.02 LandPlants
LOC_Os11g03794.1 No alias ALADIN scaffold nucleoporin of nuclear pore complex 0.02 SeedPlants
Solyc08g016801.1.1 No alias ALADIN scaffold nucleoporin of nuclear pore complex 0.02 SeedPlants
Zm00001e039214_P001 No alias ALADIN scaffold nucleoporin of nuclear pore complex 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 28 54
No external refs found!