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  5. Aev_g24698

Aev_g24698 (LHCB2.2, LHCB2)


Aliases : LHCB2.2, LHCB2

Description : component *(LHCb1/2/3) of LHC-II complex & original description: none


Gene families : OG0005324 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0005324_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g24698
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
Ala_g11635 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.01 OrthoFinder output from all 39 species
Cba_g33167 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.01 OrthoFinder output from all 39 species
Cba_g38364 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 39 species
Cba_g60348 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 39 species
Dde_g34483 LHCB2.3, LHCB2, LHCB2.4 not classified & original description: none 0.01 OrthoFinder output from all 39 species
Dde_g36279 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.01 OrthoFinder output from all 39 species
Dde_g39336 LHCB2.2, LHCB2 component *(LHCb1/2/3) of LHC-II complex & original... 0.01 OrthoFinder output from all 39 species
GSVIVT01030053001 LHCB2.3, LHCB2, LHCB2.4 Chlorophyll a-b binding protein 151, chloroplastic... 0.02 OrthoFinder output from all 39 species
Ppi_g53242 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Solyc07g047850.3.1 LHCB2.3, LHCB2,... component LHCb1/2/3 of LHC-II complex 0.07 OrthoFinder output from all 39 species
Solyc12g006140.2.1 LHCB2.2, LHCB2,... component LHCb1/2/3 of LHC-II complex 0.02 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004784 superoxide dismutase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009415 response to water IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 66 231
No external refs found!