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  5. Spa_g57097

Spa_g57097 (LOP1, TRN1)


Aliases : LOP1, TRN1

Description : not classified & original description: none


Gene families : OG0000350 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000350_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g57097
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
Aop_g39075 LOP1, TRN1 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene35256.t1 Aspi01Gene35256 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g36996 LOP1, TRN1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g12718 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g31160 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g16496 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g29059 LOP1, TRN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0031179 peptide modification IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!