Spa_g56885


Description : not classified & original description: none


Gene families : OG0000765 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000765_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g56885

Target Alias Description ECC score Gene Family Method Actions
Adi_g003821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g076502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082596 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22896 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0226.g059000 No alias not classified & original description: CDS=53-1465 0.04 OrthoFinder output from all 47 species
Cba_g06174 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g06784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g01491 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g15416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g21002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000665 No alias not classified & original description: CDS=1-1275 0.03 OrthoFinder output from all 47 species
Sam_g09204 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17101 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR023210 NADP_OxRdtase_dom 165 452
No external refs found!