1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g56814

Spa_g56814


Description : BBX class-IV transcription factor & original description: none


Gene families : OG0000403 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000403_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g56814
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00182p00043350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AT2G47890 No alias B-box type zinc finger protein with CCT domain 0.02 OrthoFinder output from all 47 species
Aob_g06573 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g08244 No alias BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45209.t1 LZF1, STH3,... BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g01876 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.11G021600.1 Ceric.11G021600 BBX class-IV transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.1Z197300.1 LZF1, STH3,... BBX class-IV transcription factor & original... 0.03 OrthoFinder output from all 47 species
LOC_Os04g41560.2 STO, LOC_Os04g41560 transcription factor (BBX-DBB) 0.02 OrthoFinder output from all 47 species
LOC_Os12g10660.1 LZF1, STH3,... transcription factor (BBX-DBB) 0.02 OrthoFinder output from all 47 species
Len_g30217 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05445 STO not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20549 No alias BBX class-IV transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Smo111647 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.05 OrthoFinder output from all 47 species
Tin_g09555 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007720_P001 STO, Zm00001e007720 transcription factor (BBX-DBB) 0.04 OrthoFinder output from all 47 species
Zm00001e010221_P001 Zm00001e010221 transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species
Zm00001e022915_P001 STO, Zm00001e022915 transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species
Zm00001e034791_P001 Zm00001e034791 transcription factor (BBX-DBB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR000315 Znf_B-box 4 42
IPR000315 Znf_B-box 55 93
No external refs found!