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  5. Spa_g56659

Spa_g56659


Description : not classified & original description: none


Gene families : OG0007049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007049_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g56659

Target Alias Description ECC score Gene Family Method Actions
Adi_g009982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.39G040600.1 Ceric.39G040600 not classified & original description: pacid=50582328... 0.04 OrthoFinder output from all 47 species
Dac_g11826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015340001 No alias Probable RNA methyltransferase At5g51130 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os08g42760.1 LOC_Os08g42760 Probable RNA methyltransferase At5g51130 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014231 No alias not classified & original description: CDS=54-908 0.02 OrthoFinder output from all 47 species
Sam_g50048 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR010675 Bin3_C 294 400
No external refs found!