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  4. Sequence
  5. Spa_g56449

Spa_g56449


Description : not classified & original description: none


Gene families : OG0000236 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000236_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g56449

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00131p00055770 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00138p00069300 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G43020 No alias Protein of unknown function, DUF547 0.04 OrthoFinder output from all 47 species
AT3G12540 No alias Protein of unknown function, DUF547 0.02 OrthoFinder output from all 47 species
AT4G37080 No alias Protein of unknown function, DUF547 0.06 OrthoFinder output from all 47 species
AT5G42690 No alias Protein of unknown function, DUF547 0.02 OrthoFinder output from all 47 species
AT5G60720 No alias Protein of unknown function, DUF547 0.02 OrthoFinder output from all 47 species
Aev_g13882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03826 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10150 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g16129 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g07461 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g08833 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g11890 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g22125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46206.t1 Aspi01Gene46206 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene50311.t2 Aspi01Gene50311 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0064.g035514 No alias not classified & original description: CDS=742-2646 0.03 OrthoFinder output from all 47 species
Cba_g05260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G060000.1 Ceric.02G060000 not classified & original description: pacid=50584416... 0.05 OrthoFinder output from all 47 species
Ceric.05G072100.1 Ceric.05G072100 not classified & original description: pacid=50579173... 0.03 OrthoFinder output from all 47 species
Ceric.19G019200.1 Ceric.19G019200 not classified & original description: pacid=50576159... 0.03 OrthoFinder output from all 47 species
Dac_g13842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14778 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g23842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08174 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g37118 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01001955001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01002634001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01002886001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01004717001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01031903001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_17913 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g05900.1 LOC_Os02g05900 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g64230.1 LOC_Os03g64230 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os09g28850.1 LOC_Os09g28850 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g07477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05619 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g37222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_19648g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_90792g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_98673g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp7g01740.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g21403 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g21647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g36590 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03119 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07704 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g09324 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g09584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13997 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g14919 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g45564 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g62402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000442 No alias not classified & original description: CDS=698-2671 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0090.g018756 No alias not classified & original description: CDS=1-2328 0.03 OrthoFinder output from all 47 species
Sam_g35283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g090580.3.1 Solyc02g090580 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc04g082970.4.1 Solyc04g082970 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc10g051030.2.1 Solyc10g051030 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g14701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13862 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002322_P002 Zm00001e002322 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e011613_P001 Zm00001e011613 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e013087_P001 Zm00001e013087 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e027120_P001 Zm00001e027120 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e034560_P003 Zm00001e034560 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR025757 MIP1_Leuzipper 54 132
No external refs found!