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  5. Spa_g56359

Spa_g56359 (CSLC6, ATCSLC06,...)


Aliases : CSLC6, ATCSLC06, ATCSLC6, CSLC06

Description : EC_2.4 glycosyltransferase & original description: none


Gene families : OG0000269 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000269_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g56359

Target Alias Description ECC score Gene Family Method Actions
AT3G56000 ATCSLA14, CSLA14 cellulose synthase like A14 0.04 OrthoFinder output from all 47 species
AT4G07960 ATCSLC12, CSLC12 Cellulose-synthase-like C12 0.03 OrthoFinder output from all 47 species
AT5G16190 CSLA11, ATCSLA11 cellulose synthase like A11 0.03 OrthoFinder output from all 47 species
Adi_g006848 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g021713 ATCSLA9, RAT4,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g032524 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g051851 ATCSLA3, CSLA03,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18463 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g19078 ATCSLC12, CSLC12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02357 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g22176 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g24097 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09556 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g12570 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0111.g045661 ATCSLC05,... EC_2.4 glycosyltransferase & original description: CDS=339-2264 0.02 OrthoFinder output from all 47 species
Azfi_s0141.g051312 CSLA02, ATCSLA2,... not classified & original description: CDS=1-639 0.04 OrthoFinder output from all 47 species
Ceric.03G046900.1 ATCSLC05,... EC_2.4 glycosyltransferase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.1Z016500.1 ATCSLC05,... EC_2.4 glycosyltransferase & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g03982 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01031405001 CSLA02, ATCSLA2,... Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.03 OrthoFinder output from all 47 species
GSVIVT01034719001 ATCSLA9, RAT4,... Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.04 OrthoFinder output from all 47 species
Gb_24488 ATCSLC05,... 1,4-beta-glucan synthase (CSLC) 0.02 OrthoFinder output from all 47 species
LOC_Os07g03260.1 ATCSLC12,... 1,4-beta-glucan synthase (CSLC) 0.03 OrthoFinder output from all 47 species
Lfl_g09617 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429365g0010 ATCSLC05,... 1,4-beta-glucan synthase (CSLC) 0.03 OrthoFinder output from all 47 species
Msp_g05368 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g07086 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23566 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30866 ATCSLC05,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g32773 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14248 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000032 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: CDS=377-2032 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g008982 ATCSLC05,... EC_2.4 glycosyltransferase & original description: CDS=298-2322 0.03 OrthoFinder output from all 47 species
Sam_g13852 No alias EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo230176 ATCSLA9, RAT4,... Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.02 OrthoFinder output from all 47 species
Solyc11g066820.2.1 CSLA02, ATCSLA2,... mannan synthase (CSLA) 0.02 OrthoFinder output from all 47 species
Solyc12g088240.2.1 ATCSLC12,... 1,4-beta-glucan synthase (CSLC) 0.03 OrthoFinder output from all 47 species
Spa_g22503 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45654 ATCSLC05,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21002 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR001173 Glyco_trans_2-like 6 139
No external refs found!