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  5. Aev_g24567

Aev_g24567


Description : TruA-type tRNA pseudouridine synthase & original description: none


Gene families : OG0006942 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006942_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g24567
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AT5G35400 No alias Pseudouridine synthase family protein 0.05 OrthoFinder output from all 47 species
Als_g32940 No alias TruA-type tRNA pseudouridine synthase & original... 0.06 OrthoFinder output from all 47 species
Aspi01Gene33851.t1 Aspi01Gene33851 TruA-type tRNA pseudouridine synthase & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene33853.t1 Aspi01Gene33853 TruA-type tRNA pseudouridine synthase & original... 0.01 OrthoFinder output from all 47 species
Azfi_s0159.g053926 No alias TruA-type tRNA pseudouridine synthase & original... 0.02 OrthoFinder output from all 47 species
Cba_g62731 No alias TruA-type tRNA pseudouridine synthase & original... 0.04 OrthoFinder output from all 47 species
Ceric.14G007000.1 Ceric.14G007000 TruA-type tRNA pseudouridine synthase & original... 0.02 OrthoFinder output from all 47 species
Dac_g29641 No alias TruA-type tRNA pseudouridine synthase & original... 0.04 OrthoFinder output from all 47 species
Dde_g11763 No alias TruA-type tRNA pseudouridine synthase & original... 0.03 OrthoFinder output from all 47 species
Dde_g24789 No alias TruA-type tRNA pseudouridine synthase & original... 0.08 OrthoFinder output from all 47 species
Ehy_g18868 No alias TruA-type tRNA pseudouridine synthase & original... 0.02 OrthoFinder output from all 47 species
Msp_g47410 No alias TruA-type tRNA pseudouridine synthase & original... 0.03 OrthoFinder output from all 47 species
Nbi_g12980 No alias TruA-type tRNA pseudouridine synthase & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0235.g026544 No alias TruA-type tRNA pseudouridine synthase & original... 0.01 OrthoFinder output from all 47 species
Sam_g37239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0009451 RNA modification IEA Interproscan
MF GO:0009982 pseudouridine synthase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR020097 PsdUridine_synth_TruA_a/b_dom 404 493
IPR020097 PsdUridine_synth_TruA_a/b_dom 191 298
No external refs found!