Spa_g55989

Description : not classified & original description: none

Gene families : OG0000324 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000324_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g55989

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00085p00052820	CDC48A, CDC48,...	Cell division cycle protein 48 homolog OS=Glycine max	0.02	OrthoFinder output from all 47 species
Als_g14973	No alias	platform ATPase CDC48 & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0178.g056166	No alias	platform ATPase CDC48 & original description: CDS=301-2751	0.03	OrthoFinder output from all 47 species
Azfi_s0210.g058064	No alias	platform ATPase CDC48 & original description: CDS=1-2484	0.03	OrthoFinder output from all 47 species
Cba_g67891	CDC48A, CDC48, ATCDC48	platform ATPase CDC48 & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01025723001	No alias	Cell division control protein 48 homolog D...	0.03	OrthoFinder output from all 47 species
Pnu_g16719	No alias	platform ATPase CDC48 & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e012761_P001	Zm00001e012761	platform ATPase (CDC48)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006914	autophagy	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
MF	GO:0019783	ubiquitin-like protein peptidase activity	IEP	HCCA
MF	GO:0019786	Atg8-specific peptidase activity	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0061919	process utilizing autophagic mechanism	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR015415	Vps4_C	170	211
IPR041569	AAA_lid_3	120	161
IPR003959	ATPase_AAA_core	2	98

External Links

No external refs found!