Spa_g55586


Description : ssDNA-binding protein *(OSB) & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g55586

Target Alias Description ECC score Gene Family Method Actions
Ala_g04672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16579 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20781 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g22758 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g33780 DOT4 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g19882 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g01672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02955 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03413 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g03462 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g04899 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21318 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21833 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g28512 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g30250 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g40992 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g19016 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10427854g0020 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.05 OrthoFinder output from all 47 species
Msp_g12146 OTP84 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g03798 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Nbi_g04844 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06767 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07302 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07619 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g15171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19491 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g23582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24053 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g39331 OTP85 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g42349 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g02988 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g03644 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09259 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g09754 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09990 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12551 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g15077 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15248 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g20007 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35704 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43972 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ppi_g04648 VAC1, ECB2, ATECB2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g09525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31446 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32253 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g33094 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g42323 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53563 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56901 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g23464 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 138 160
IPR002885 Pentatricopeptide_repeat 342 366
IPR002885 Pentatricopeptide_repeat 240 263
IPR002885 Pentatricopeptide_repeat 163 210
IPR002885 Pentatricopeptide_repeat 265 312
No external refs found!