Spa_g55578


Description : not classified & original description: none


Gene families : OG0000977 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000977_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g55578
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AT1G72410 No alias COP1-interacting protein-related 0.03 OrthoFinder output from all 47 species
Adi_g011891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27214 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g50853 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g08158 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13581 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g33416 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g43208 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Cba_g62258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G042600.1 Ceric.12G042600 not classified & original description: pacid=50602196... 0.03 OrthoFinder output from all 47 species
Ceric.14G089800.1 Ceric.14G089800 not classified & original description: pacid=50634875... 0.03 OrthoFinder output from all 47 species
Ceric.23G038500.1 Ceric.23G038500 not classified & original description: pacid=50611329... 0.03 OrthoFinder output from all 47 species
Dac_g12604 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g23146 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g39834 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06229 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07876 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_38631 No alias COP1-interacting protein 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os07g42410.1 LOC_Os07g42410 COP1-interacting protein 7 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g12756 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g23798 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g11498 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g16943 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g18313 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_37764g0030 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g13987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g20244 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g07636 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g21641 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g38202 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12627 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g08420 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16282 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g60546 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g32529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g34928 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g36789 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g52368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g122040.4.1 Solyc03g122040 COP1-interacting protein 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g02216 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07113 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g47198 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g47576 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g08685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11507 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13256 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e035552_P002 Zm00001e035552 COP1-interacting protein 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!