Spa_g55548


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g55548

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00155170 CRR2,... Pentatricopeptide repeat-containing protein At3g46790,... 0.02 OrthoFinder output from all 47 species
Aev_g38690 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g49640 REME1 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g07993 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g12477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g12581 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g13397 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g15080 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g16602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36528 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g39563 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g04216 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04818 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06261 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06415 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15782 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19052 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19109 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g20449 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g23634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47260 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g54955 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58582 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g61852 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03124 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03415 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03761 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g06104 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g06388 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07361 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09616 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14000 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16515 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16516 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16533 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16842 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g17678 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20531 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g22281 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23956 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g28315 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28692 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28710 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g29854 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29941 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33111 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g38568 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68032 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g70953 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07757 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14047 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29524 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g71783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G077900.1 Ceric.14G077900 not classified & original description: pacid=50634382... 0.06 OrthoFinder output from all 47 species
Ceric.19G049000.1 Ceric.19G049000 not classified & original description: pacid=50576332... 0.05 OrthoFinder output from all 47 species
Ceric.22G014800.1 Ceric.22G014800 not classified & original description: pacid=50613770... 0.05 OrthoFinder output from all 47 species
Ceric.25G017100.1 OTP86, Ceric.25G017100 not classified & original description: pacid=50593496... 0.04 OrthoFinder output from all 47 species
Ceric.25G017300.1 Ceric.25G017300 not classified & original description: pacid=50594270... 0.05 OrthoFinder output from all 47 species
Ceric.27G053200.1 Ceric.27G053200 not classified & original description: pacid=50604881... 0.04 OrthoFinder output from all 47 species
Ceric.36G053200.1 CRR22, Ceric.36G053200 not classified & original description: pacid=50568627... 0.04 OrthoFinder output from all 47 species
Ceric.39G028600.1 Ceric.39G028600 not classified & original description: pacid=50582938... 0.04 OrthoFinder output from all 47 species
Dac_g03359 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g03846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09382 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20347 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20433 CRR2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g20899 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24746 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g25020 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42645 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43186 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06448 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07919 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08601 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08727 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08906 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g16394 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16957 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g45167 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g45946 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g48675 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g50134 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21668 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21842 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28521 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02726 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13294 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g08595 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04178 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_109134g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Msp_g12042 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g13328 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41106 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g45609 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45689 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g46064 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g46086 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g47517 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g47672 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g05745 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07805 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21947 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g43844 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g08941 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20007 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33384 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20500 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g07204 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g02061 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g23933 REME1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g07694 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g32426 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e013713_P001 Zm00001e013713 Pentatricopeptide repeat-containing protein At4g20770... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 194 218
IPR002885 Pentatricopeptide_repeat 92 114
IPR002885 Pentatricopeptide_repeat 118 164
IPR002885 Pentatricopeptide_repeat 15 62
No external refs found!