Spa_g54907


Description : not classified & original description: none


Gene families : OG0002918 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002918_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g54907

Target Alias Description ECC score Gene Family Method Actions
AT1G11070 No alias BEST Arabidopsis thaliana protein match is:... 0.02 OrthoFinder output from all 47 species
AT4G04980 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Adi_g011448 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g31499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g50127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03543 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene03298.t1 Aspi01Gene03298 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56553.t2 Aspi01Gene56553 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g14544 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.06G065600.1 Ceric.06G065600 not classified & original description: pacid=50619785... 0.03 OrthoFinder output from all 47 species
Ceric.16G012800.1 Ceric.16G012800 not classified & original description: pacid=50590071... 0.07 OrthoFinder output from all 47 species
Ceric.34G023900.1 Ceric.34G023900 not classified & original description: pacid=50622927... 0.03 OrthoFinder output from all 47 species
Dac_g01774 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01007118001 No alias Uncharacterized protein At4g04980 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01030542001 No alias Uncharacterized protein At4g04980 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Len_g59211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g16488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_103286g0020 No alias Uncharacterized protein At4g04980 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g02486 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05879 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g20616 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43167 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01327 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011181 No alias not classified & original description: CDS=1-2319 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0185.g025036 No alias not classified & original description: CDS=1-2685 0.03 OrthoFinder output from all 47 species
Sam_g24886 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g078660.4.1 Solyc02g078660 Uncharacterized protein At4g04980 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e023658_P001 Zm00001e023658 Uncharacterized protein At4g04980 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!