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  5. Spa_g54820

Spa_g54820


Description : not classified & original description: none


Gene families : OG0002286 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002286_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g54820

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00267520 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Cba_g44165 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19941 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g26266 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16434 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009356 No alias not classified & original description: CDS=1-1170 0.03 OrthoFinder output from all 47 species
Solyc03g006620.3.1 Solyc03g006620 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR008480 DUF761_pln 490 524
No external refs found!