Spa_g54752 (KNAT3)

Aliases : KNAT3

Description : KNOX-type transcription factor & original description: none

Gene families : OG0000252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g54752

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00026p00162850	KNAT3,...	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
Aev_g11433	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g21136	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g31921	KNAT4	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01035921001	KNAT3	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
Ore_g17777	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g100510.4.1	KNAT6, KNAT6L,...	transcription factor (KNOX)	0.02	OrthoFinder output from all 47 species
Zm00001e005545_P001	BP, BP1, KNAT1,...	transcription factor (KNOX)	0.02	OrthoFinder output from all 47 species
Zm00001e025100_P003	KNAT3, Zm00001e025100	transcription factor (KNOX)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
BP	GO:0006801	superoxide metabolic process	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0072593	reactive oxygen species metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005541	KNOX2	273	320
IPR005540	KNOX1	212	251
IPR008422	Homeobox_KN_domain	418	457

External Links

No external refs found!