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  5. Spa_g54739

Spa_g54739


Description : transcriptional co-regulator *(OFP) & original description: none


Gene families : OG0000209 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000209_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g54739

Target Alias Description ECC score Gene Family Method Actions
AT2G30400 OFP2, ATOFP2 ovate family protein 2 0.03 OrthoFinder output from all 47 species
AT2G32100 OFP16, ATOFP16 ovate family protein 16 0.02 OrthoFinder output from all 47 species
AT3G52550 No alias BEST Arabidopsis thaliana protein match is: ovate family... 0.04 OrthoFinder output from all 47 species
AT4G04025 No alias No description available 0.03 OrthoFinder output from all 47 species
AT5G58360 ATOFP3, OFP3 ovate family protein 3 0.03 OrthoFinder output from all 47 species
Aev_g40639 OFP4, ATOFP4 transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g23688 No alias transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene32425.t1 Aspi01Gene32425 transcriptional co-regulator *(OFP) & original description: none 0.04 OrthoFinder output from all 47 species

ECC pair
Aspi01Gene32428.t1 ATOFP6, OFP6,... transcriptional co-regulator *(OFP) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g16868 OFP4, ATOFP4 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G002600.1 ATOFP5, OFP5,... transcriptional co-regulator *(OFP) & original... 0.03 OrthoFinder output from all 47 species
Ceric.13G055200.1 OFP4, ATOFP4,... transcriptional co-regulator *(OFP) & original... 0.03 OrthoFinder output from all 47 species
Ceric.26G022300.1 OFP4, ATOFP4,... transcriptional co-regulator *(OFP) & original... 0.05 OrthoFinder output from all 47 species
Ehy_g03668 OFP4, ATOFP4 transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_20898 ATOFP6, OFP6 transcription factor (OFP) 0.03 OrthoFinder output from all 47 species
Gb_22142 OFP4, ATOFP4 transcription factor (OFP) 0.03 OrthoFinder output from all 47 species
LOC_Os10g38880.1 OFP8, ATOFP8,... transcription factor (OFP) 0.03 OrthoFinder output from all 47 species
MA_798051g0010 ATOFP5, OFP5 transcription factor (OFP) 0.04 OrthoFinder output from all 47 species
Ppi_g31234 ATOFP3, OFP3 transcriptional co-regulator *(OFP) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e024173_P001 Zm00001e024173 transcription factor (OFP) 0.03 OrthoFinder output from all 47 species
Zm00001e035852_P001 ATOFP7, OFP7,... transcription factor (OFP) 0.03 OrthoFinder output from all 47 species
Zm00001e041975_P001 ATOFP13, OFP13,... transcription factor (OFP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
CC GO:0042579 microbody IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
InterPro domains Description Start Stop
IPR006458 Ovate_C 228 281
No external refs found!