Spa_g54649 (ATARFA1B, ARFA1B)

Aliases : ATARFA1B, ARFA1B

Description : ARF-GTPase *(ARF1) & original description: none

Gene families : OG0000301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g54649

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00218180	ARFA1E, ATARFA1E	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.02	OrthoFinder output from all 47 species
AMTR_s00096p00110370	ATARFA1B, ARFA1B	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.02	OrthoFinder output from all 47 species
Adi_g009714	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g048023	ATARFA1F, ARFA1F	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g051592	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g12102	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g07699	ATARFB1B, ARFB1B	ARF-GTPase *(ARFA) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g07482	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g19389	ATARFB1B, ARFB1B	ARF-GTPase *(ARFA) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g07952	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g51949	ATARFB1B, ARFB1B	ARF-GTPase *(ARFA) & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os10g42940.1	ATARFB1B,...	ARF-GTPase	0.03	OrthoFinder output from all 47 species
Lfl_g23069	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g31478	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
MA_12637g0010	ATARFA1B, ARFA1B	ARF-GTPase	0.03	OrthoFinder output from all 47 species
Mp2g11170.1	ATARFA1B, ARFA1B	ARF-GTPase	0.03	OrthoFinder output from all 47 species
Mp2g14560.1	ATARFA1F, ARFA1F	ARF-GTPase	0.02	OrthoFinder output from all 47 species
Mp4g04230.1	ATARFA1F, ARFA1F	ARF-GTPase	0.03	OrthoFinder output from all 47 species
Pir_g02984	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g28789	ATARFA1F, ARFA1F	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Solyc02g092970.3.1	ATARF1, ARF1,...	ARF-GTPase	0.04	OrthoFinder output from all 47 species
Tin_g44186	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
BP	GO:0005984	disaccharide metabolic process	IEP	HCCA
BP	GO:0005991	trehalose metabolic process	IEP	HCCA
BP	GO:0005992	trehalose biosynthetic process	IEP	HCCA
BP	GO:0007034	vacuolar transport	IEP	HCCA
BP	GO:0009311	oligosaccharide metabolic process	IEP	HCCA
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
MF	GO:0016846	carbon-sulfur lyase activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
MF	GO:0030247	polysaccharide binding	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0046351	disaccharide biosynthetic process	IEP	HCCA
MF	GO:2001070	starch binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006689	Small_GTPase_ARF/SAR	5	176

External Links

No external refs found!

Spa_g54649 (ATARFA1B, ARFA1B)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation