Spa_g54636 (VAC1, ECB2, ATECB2)


Aliases : VAC1, ECB2, ATECB2

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g54636
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Adi_g001971 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g002816 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g003816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g004499 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g004506 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005518 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005791 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g009077 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g010601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g010621 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g013556 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g015421 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015534 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g030218 LPA66 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g034312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034905 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035555 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g036658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g043409 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g051582 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g053630 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g066076 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g066095 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g066722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067178 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g069035 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g069068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069246 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g074726 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g081866 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g082696 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g089352 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g095207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g098110 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g099122 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g099224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099240 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g099265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099276 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g100991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101054 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g101197 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g101216 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g102724 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g11263 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g48664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12445 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25745 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g30592 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36206 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g12064 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03124 OTP82 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g03709 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g04440 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04618 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g08870 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09609 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g17428 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g22438 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g26341 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g28403 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28711 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g30400 DOT4 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g31523 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33579 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g36436 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g38034 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g63229 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g68127 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g70213 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70449 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70953 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene12035.t1 Aspi01Gene12035 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0264.g060909 EMB2758 not classified & original description: CDS=1-2373 0.06 OrthoFinder output from all 47 species
Cba_g20506 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g29847 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67635 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.17G033700.1 VAC1, ECB2,... not classified & original description: pacid=50617387... 0.04 OrthoFinder output from all 47 species
Dac_g03825 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g04664 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g04715 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g05642 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g05707 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18410 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g18724 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g21248 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g21951 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30276 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g32669 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g40230 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g43218 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g45106 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g45763 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g05682 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08084 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g26325 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28844 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g38218 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g29034 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os09g07780.1 OTP84, LOC_Os09g07780 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
Len_g05423 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g08128 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g10356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g12152 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g17356 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g18274 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19000 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g25958 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g47144 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g31355 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g01336 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g03935 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g14419 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17296 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17695 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17708 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g19370 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g23154 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g24337 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g24971 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25127 No alias ssDNA-binding protein *(OSB) & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g25173 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28789 No alias ssDNA-binding protein *(OSB) & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g30376 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g30522 OTP81 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g33329 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34019 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g40961 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g41084 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41100 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41112 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g42970 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g45471 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45762 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g46118 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g46329 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g47222 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g10308 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g14034 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g20192 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g23739 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g38613 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g41053 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g16979 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35928 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43227 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03304 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03406 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g09779 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g11796 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g12598 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13547 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13563 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13575 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14507 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17297 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g48319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g49579 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57543 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g57550 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57910 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g60793 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63208 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63389 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63650 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g63895 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g64859 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g65497 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g04704 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g05328 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g06488 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07362 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13349 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15635 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18166 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g32088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g43570 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g49408 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53593 DOT4 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g57466 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61878 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006801 EMB2261 not classified & original description: CDS=90-2282 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0120.g021374 No alias not classified & original description: CDS=1-1881 0.02 OrthoFinder output from all 47 species
Smo99756 No alias Pentatricopeptide repeat-containing protein At2g39620... 0.02 OrthoFinder output from all 47 species
Solyc03g007840.1.1 Solyc03g007840 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc06g068810.4.1 Solyc06g068810 Pentatricopeptide repeat-containing protein At5g50990... 0.04 OrthoFinder output from all 47 species
Spa_g13637 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g13686 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g14331 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g14336 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14510 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g15016 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g18928 EMB2758 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g21861 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Spa_g21942 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g23932 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g23960 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26191 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26356 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g31188 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g33028 EMB2758 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g41901 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g48112 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g52644 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54669 MEF9 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g57321 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g05167 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g05231 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06095 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08462 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g11480 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13065 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13479 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17626 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17635 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g21829 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g22109 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g23009 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35068 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35670 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 344 390
IPR002885 Pentatricopeptide_repeat 37 81
IPR002885 Pentatricopeptide_repeat 139 186
IPR002885 Pentatricopeptide_repeat 242 288
IPR002885 Pentatricopeptide_repeat 446 492
IPR002885 Pentatricopeptide_repeat 318 339
IPR002885 Pentatricopeptide_repeat 520 544
IPR002885 Pentatricopeptide_repeat 550 573
No external refs found!