Spa_g54623 (ATDEF1, PDF1A)

Aliases : ATDEF1, PDF1A

Description : EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond & original description: none

Gene families : OG0007852 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007852_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g54623
Cluster	HCCA: Cluster_18

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00081p00136350	ATDEF1, PDF1A,...	Protein biosynthesis.organelle translation...	0.01	OrthoFinder output from all 47 species
Aob_g13775	ATDEF1, PDF1A	EC_3.5 hydrolase acting on carbon-nitrogen bond, other...	0.04	OrthoFinder output from all 47 species
Zm00001e035712_P002	ATDEF1, PDF1A,...	formylmethionine deformylase (PDF)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	None	Extended
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	None	Extended
MF	GO:0042586	peptide deformylase activity	IEA	Interproscan

Type	GO Term	Name	Evidence	Source
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR023635	Peptide_deformylase	76	132
IPR023635	Peptide_deformylase	167	266

External Links

No external refs found!