Spa_g53365

Description : 2S globulin seed storage protein & original description: none

Gene families : OG0000380 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g53365

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00071p00062800	evm_27.TU.AmTr_v1...	Chitinase 2 OS=Tulipa bakeri	0.05	OrthoFinder output from all 47 species
Ala_g32401	No alias	2S globulin seed storage protein & original description: none	0.05	OrthoFinder output from all 47 species
Als_g37029	No alias	2S globulin seed storage protein & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene01958.t1	Aspi01Gene01958	2S globulin seed storage protein & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.1Z063200.1	Ceric.1Z063200	2S globulin seed storage protein & original description:...	0.05	OrthoFinder output from all 47 species
Ceric.1Z210800.1	Ceric.1Z210800	2S globulin seed storage protein & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.1Z224900.1	Ceric.1Z224900	2S globulin seed storage protein & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g07284	No alias	2S globulin seed storage protein & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g34761	No alias	2S globulin seed storage protein & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g11599	No alias	2S globulin seed storage protein & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g13030	No alias	2S globulin seed storage protein & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0046983	protein dimerization activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001223	Glyco_hydro18_cat	193	321
IPR018392	LysM_dom	65	107
IPR018392	LysM_dom	9	50

External Links

No external refs found!