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  5. Spa_g53286

Spa_g53286 (OTP84)


Aliases : OTP84

Description : not classified & original description: none


Gene families : OG0013744 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0013744_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g53286
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
Aop_g31277 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g07787 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G028400.1 Ceric.10G028400 not classified & original description: pacid=50612982... 0.04 OrthoFinder output from all 47 species
Dde_g23580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g47946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64914 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g46372 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13157 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 508 555
IPR002885 Pentatricopeptide_repeat 105 153
IPR002885 Pentatricopeptide_repeat 308 351
IPR002885 Pentatricopeptide_repeat 207 254
IPR032867 DYW_dom 734 809
IPR002885 Pentatricopeptide_repeat 178 206
IPR002885 Pentatricopeptide_repeat 282 303
IPR002885 Pentatricopeptide_repeat 583 605
IPR002885 Pentatricopeptide_repeat 80 102
IPR002885 Pentatricopeptide_repeat 412 438
IPR002885 Pentatricopeptide_repeat 8 34
No external refs found!