Spa_g53271


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g53271

Target Alias Description ECC score Gene Family Method Actions
AT3G20730 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G08210 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G44230 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.01 OrthoFinder output from all 47 species
Adi_g002045 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g003168 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g004392 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004975 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005655 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005743 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g007209 OTP81 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021679 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034320 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035023 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036585 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g036673 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g043109 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g055183 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g055474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g059925 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069068 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069197 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069262 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g082055 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g082256 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g086259 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g087234 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g098198 SLO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g100785 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g101245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g111634 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16839 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g34402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g17863 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18507 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30788 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g46291 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g54958 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04742 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05266 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28660 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g06481 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g23980 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g25161 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02406.t1 Aspi01Gene02406 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene04772.t1 CRR22, Aspi01Gene04772 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene15587.t1 DOT4, Aspi01Gene15587 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28051.t1 Aspi01Gene28051 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.01 OrthoFinder output from all 47 species
Aspi01Gene28051.t3 Aspi01Gene28051 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene34823.t1 Aspi01Gene34823 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0032.g024917 No alias not classified & original description: CDS=1-3621 0.01 OrthoFinder output from all 47 species
Azfi_s0082.g038688 No alias not classified & original description: CDS=1-3078 0.03 OrthoFinder output from all 47 species
Azfi_s1835.g107332 CRR22 not classified & original description: CDS=1-2094 0.04 OrthoFinder output from all 47 species
Cba_g10212 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G058500.1 Ceric.02G058500 not classified & original description: pacid=50584148... 0.02 OrthoFinder output from all 47 species
Ceric.32G057100.1 Ceric.32G057100 not classified & original description: pacid=50598475... 0.01 OrthoFinder output from all 47 species
Ceric.35G035600.1 Ceric.35G035600 not classified & original description: pacid=50580802... 0.01 OrthoFinder output from all 47 species
Dac_g04642 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g09096 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g14022 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g16781 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g19096 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g23403 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g26973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30165 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g30285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04808 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08946 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g16929 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g17093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50144 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02358 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03455 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g04453 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g09930 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g10840 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g18670 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g19684 EMB2758 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g21521 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g23570 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g26344 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26464 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g28512 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g46247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g47808 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g51448 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01033348001 No alias Cellular respiration.oxidative phosphorylation.NADH... 0.01 OrthoFinder output from all 47 species
Len_g03891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g03892 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g03909 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04325 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g07790 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g08349 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g12219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12295 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g13403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g16432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18991 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g25856 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g30369 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g35291 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g47056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g47679 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g50268 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g55705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06268 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g19252 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g22644 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g22768 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g23110 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g23168 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g46446 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Nbi_g23755 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25468 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29244 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g32625 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g01804 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17591 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g05441 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10801 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12099 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12976 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g28575 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g32537 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g32622 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g39036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57366 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g62128 OTP86 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g63660 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63903 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g03495 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30610 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31163 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g55046 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g63100 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007793 MEF19 not classified & original description: CDS=1-1725 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018986 No alias not classified & original description: CDS=1-1941 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0258.g026852 No alias not classified & original description: CDS=1-954 0.03 OrthoFinder output from all 47 species
Sam_g12585 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15563 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29293 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo102435 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.01 OrthoFinder output from all 47 species
Smo132819 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Smo80365 CRR2 Pentatricopeptide repeat-containing protein At4g13650... 0.01 OrthoFinder output from all 47 species
Tin_g04183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06120 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g29126 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g29179 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g43907 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 198 245
IPR002885 Pentatricopeptide_repeat 97 143
No external refs found!