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  4. Sequence
  5. Spa_g53224

Spa_g53224


Description : not classified & original description: none


Gene families : OG0000156 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000156_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g53224

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0104.g044822 No alias regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Cba_g24777 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Ceric.05G100900.1 Ceric.05G100900 regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Dac_g14938 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Ehy_g09166 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Pir_g00662 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Ppi_g10785 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Ppi_g31009 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Smo441947 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 OrthoFinder output from all 47 species
Solyc05g043247.1.1 ATTZF1, ATCTH,... mRNA-binding regulatory factor (TZF) 0.02 OrthoFinder output from all 47 species
Zm00001e029465_P001 Zm00001e029465 mRNA-binding regulatory factor (TZF) 0.02 OrthoFinder output from all 47 species
Zm00001e032199_P001 ATTZF1, ATCTH,... mRNA-binding regulatory factor (TZF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA

No InterPro domains available for this sequence

No external refs found!