Spa_g53143


Description : not classified & original description: none


Gene families : OG0000859 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000859_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g53143

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00110320 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 OrthoFinder output from all 47 species
AMTR_s00154p00086540 evm_27.TU.AmTr_v1... Zinc finger CCCH domain-containing protein 38... 0.04 OrthoFinder output from all 47 species
AMTR_s00154p00087040 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Adi_g020080 No alias component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Adi_g051624 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g086845 No alias component *(FES1) of FRI-C transcription effector... 0.06 OrthoFinder output from all 47 species
Ala_g14556 No alias component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Ala_g33431 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Ala_g38718 No alias component *(FES1) of FRI-C transcription effector... 0.06 OrthoFinder output from all 47 species
Als_g05138 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Aop_g08771 No alias component *(FES1) of FRI-C transcription effector... 0.02 OrthoFinder output from all 47 species
Aop_g27511 No alias component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Aop_g31626 No alias component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Cba_g01885 No alias component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Cba_g12381 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Cba_g23169 No alias component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Cba_g29388 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Ceric.09G003600.1 Ceric.09G003600 component *(FES1) of FRI-C transcription effector... 0.05 OrthoFinder output from all 47 species
Ceric.20G066500.1 Ceric.20G066500 component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Ceric.20G084000.1 Ceric.20G084000 component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Ceric.29G050700.1 Ceric.29G050700 component *(FES1) of FRI-C transcription effector... 0.05 OrthoFinder output from all 47 species
Cre01.g003450 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g07178 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Ehy_g18865 No alias component *(FES1) of FRI-C transcription effector... 0.02 OrthoFinder output from all 47 species
GSVIVT01008114001 No alias Zinc finger CCCH domain-containing protein 38... 0.02 OrthoFinder output from all 47 species
GSVIVT01010035001 ACCD RNA biosynthesis.transcriptional activation.C3H zinc... 0.04 OrthoFinder output from all 47 species
LOC_Os08g04170.1 LOC_Os08g04170 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Lfl_g05738 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Lfl_g21498 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g29094 No alias component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
MA_111475g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_321233g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_8408g0030 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g05400.1 No alias Zinc finger CCCH domain-containing protein 55 OS=Oryza... 0.02 OrthoFinder output from all 47 species
Msp_g15688 No alias component *(FES1) of FRI-C transcription effector... 0.05 OrthoFinder output from all 47 species
Nbi_g33981 No alias component *(FES1) of FRI-C transcription effector... 0.02 OrthoFinder output from all 47 species
Ore_g08246 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30501 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Ore_g37073 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Ppi_g43758 No alias component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Solyc03g006350.3.1 FES1, Solyc03g006350 C3H zinc finger transcription factor 0.06 OrthoFinder output from all 47 species
Solyc04g064800.4.1 Solyc04g064800 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Spa_g19280 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Tin_g13648 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Tin_g20286 No alias component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Zm00001e032035_P001 FES1, Zm00001e032035 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e040314_P001 Zm00001e040314 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009306 protein secretion IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0035592 establishment of protein localization to extracellular region IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0071692 protein localization to extracellular region IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:0140352 export from cell IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!