Aliases : RPS5B, ATRPS5B
Description : component *(uS7) of small ribosomal-subunit (SSU) proteome & original description: none
Gene families : OG0002478 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002478_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT2G37270 | RPS5B, ATRPS5B | ribosomal protein 5B | 0.03 | OrthoFinder output from all 47 species | |
AT3G11940 | AML1, RPS5A, ATRPS5A | ribosomal protein 5A | 0.05 | OrthoFinder output from all 47 species | |
Azfi_s0374.g067208 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.09G021600.1 | AML1, RPS5A,... | component *(uS7) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
Cre06.g290950 | RPS5B, ATRPS5B | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g10905 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01026328001 | RPS5B, ATRPS5B | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01033419001 | RPS5B, ATRPS5B | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g01060.1 | RPS5B, ATRPS5B,... | component RPS5 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
MA_10428487g0010 | RPS5B, ATRPS5B | component RPS5 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
Mp3g10570.1 | RPS5B, ATRPS5B | component RPS5 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
Pp3c20_18970V3.1 | RPS5B, ATRPS5B,... | ribosomal protein 5B | 0.02 | OrthoFinder output from all 47 species | |
Pp3c23_6150V3.1 | RPS5B, ATRPS5B,... | ribosomal protein 5B | 0.01 | OrthoFinder output from all 47 species | |
Pp3c8_16820V3.1 | RPS5B, ATRPS5B,... | ribosomal protein 5B | 0.05 | OrthoFinder output from all 47 species | |
Sam_g15969 | No alias | component *(uS7) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Smo164593 | AML1, RPS5A, ATRPS5A | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
Smo271466 | RPS5B, ATRPS5B | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.02 | OrthoFinder output from all 47 species | |
Solyc10g078620.1.1 | AML1, RPS5A,... | component RPS5 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
Solyc11g042610.2.1 | RPS5B, ATRPS5B,... | component RPS5 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
Tin_g01481 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e025608_P002 | RPS5B, ATRPS5B,... | component RPS5 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e031425_P002 | AML1, RPS5A,... | component RPS5 of SSU proteome | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0019843 | rRNA binding | IEP | HCCA |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR023798 | Ribosomal_S7_dom | 115 | 261 |
No external refs found! |