Spa_g52962


Description : not classified & original description: none


Gene families : OG0001805 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001805_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g52962
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Ceric.04G028800.1 Ceric.04G028800 not classified & original description: pacid=50630549... 0.04 OrthoFinder output from all 47 species
Ceric.21G038800.1 Ceric.21G038800 not classified & original description: pacid=50604262... 0.06 OrthoFinder output from all 47 species
Ceric.31G023200.1 Ceric.31G023200 not classified & original description: pacid=50574593... 0.05 OrthoFinder output from all 47 species
Ceric.37G002200.1 Ceric.37G002200 not classified & original description: pacid=50616623... 0.03 OrthoFinder output from all 47 species
Ceric.37G008300.1 Ceric.37G008300 not classified & original description: pacid=50616145... 0.03 OrthoFinder output from all 47 species
Dac_g06874 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01017965001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os03g59210.1 LOC_Os03g59210 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g38470.1 LOC_Os07g38470 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc05g053180.3.1 Solyc05g053180 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e019638_P001 Zm00001e019638 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!