Pp3c17_4050V3.1


Description : RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain


Gene families : OG_01_0000043 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000043_tree ,
OG_02_0000481 (LandPlants) Phylogenetic Tree(s): OG_02_0000481_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c17_4050V3.1
Cluster HCCA: Cluster_222

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00251200 evm_27.TU.AmTr_v1... Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00008p00202090 evm_27.TU.AmTr_v1... RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00013p00256900 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.02 Archaeplastida
AMTR_s00030p00132070 evm_27.TU.AmTr_v1... Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00154p00024620 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.02 Archaeplastida
AT5G04280 No alias RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.04 Archaeplastida
Cre09.g392350 No alias Glycine-rich RNA-binding protein 2, mitochondrial... 0.02 Archaeplastida
Cre13.g602850 No alias No description available 0.02 Archaeplastida
GSVIVT01017884001 No alias No description available 0.02 Archaeplastida
Gb_40269 No alias RNA chaperone (RZ1|GR-RBP) 0.02 Archaeplastida
LOC_Os03g47800.1 No alias RNA chaperone (RZ1|GR-RBP) 0.02 Archaeplastida
LOC_Os07g08960.1 No alias RNA chaperone (RZ1|GR-RBP) 0.02 Archaeplastida
LOC_Os10g17454.1 No alias RNA editing factor (ORRM) 0.03 Archaeplastida
LOC_Os12g31800.1 No alias RNA editing factor (ORRM) 0.04 Archaeplastida
MA_10428777g0010 No alias Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba... 0.04 Archaeplastida
MA_10434075g0010 No alias component psPSRP2 of small ribosomal subunit proteome 0.02 Archaeplastida
MA_10436424g0010 No alias RNA chaperone (RZ1|GR-RBP) 0.04 Archaeplastida
Solyc01g104840.4.1 No alias RNA chaperone (RZ1|GR-RBP) 0.03 Archaeplastida
Zm00001e005260_P002 No alias RNA chaperone (RZ1|GR-RBP) 0.07 Archaeplastida
Zm00001e006287_P001 No alias RNA chaperone (RZ1|GR-RBP) 0.02 Archaeplastida
Zm00001e011440_P001 No alias RNA chaperone (RZ1|GR-RBP) 0.02 Archaeplastida
Zm00001e012278_P001 No alias RNA chaperone (RZ1|GR-RBP) 0.03 Archaeplastida
Zm00001e018330_P004 No alias RNA editing factor (ORRM) 0.02 Archaeplastida
Zm00001e033010_P001 No alias RNA chaperone (RZ1|GR-RBP) 0.05 Archaeplastida
Zm00001e039608_P001 No alias RNA editing factor (ORRM) 0.02 Archaeplastida
AMTR_s00002p00251200 evm_27.TU.AmTr_v1... Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana 0.03 LandPlants
AMTR_s00030p00132070 evm_27.TU.AmTr_v1... Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana 0.02 LandPlants
AMTR_s00030p00198740 evm_27.TU.AmTr_v1... Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana 0.02 LandPlants
AT3G26420 ATRZ-1A RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.02 LandPlants
AT5G04280 No alias RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.04 LandPlants
GSVIVT01001672001 No alias Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana 0.04 LandPlants
GSVIVT01033666001 No alias Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana 0.02 LandPlants
Gb_40269 No alias RNA chaperone (RZ1|GR-RBP) 0.02 LandPlants
LOC_Os03g47800.1 No alias RNA chaperone (RZ1|GR-RBP) 0.02 LandPlants
LOC_Os07g08960.1 No alias RNA chaperone (RZ1|GR-RBP) 0.03 LandPlants
MA_10428777g0010 No alias Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba... 0.04 LandPlants
MA_10436424g0010 No alias RNA chaperone (RZ1|GR-RBP) 0.03 LandPlants
MA_168323g0010 No alias RNA chaperone (RZ1|GR-RBP) 0.02 LandPlants
Solyc01g104840.4.1 No alias RNA chaperone (RZ1|GR-RBP) 0.03 LandPlants
Zm00001e005260_P002 No alias RNA chaperone (RZ1|GR-RBP) 0.08 LandPlants
Zm00001e006287_P001 No alias RNA chaperone (RZ1|GR-RBP) 0.02 LandPlants
Zm00001e011440_P001 No alias RNA chaperone (RZ1|GR-RBP) 0.02 LandPlants
Zm00001e012278_P001 No alias RNA chaperone (RZ1|GR-RBP) 0.03 LandPlants
Zm00001e033010_P001 No alias RNA chaperone (RZ1|GR-RBP) 0.05 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!