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  5. Spa_g52330

Spa_g52330


Description : not classified & original description: none


Gene families : OG0000425 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000425_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g52330

Target Alias Description ECC score Gene Family Method Actions
AT1G62130 No alias AAA-type ATPase family protein 0.03 OrthoFinder output from all 47 species
Aev_g14020 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g27974 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g20700 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g30592 No alias EC_3.6 hydrolase acting on acid anhydride & original... 0.03 OrthoFinder output from all 47 species
Cba_g05976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G049600.1 Ceric.14G049600 not classified & original description: pacid=50633231... 0.05 OrthoFinder output from all 47 species
Dde_g15909 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01012038001 No alias ATPase family AAA domain-containing protein FIGL1... 0.03 OrthoFinder output from all 47 species
Gb_11437 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_15617 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g17632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_16105g0010 No alias Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_896563g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Sam_g29682 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g007760.3.1 Solyc03g007760 ATPase family AAA domain-containing protein FIGL1... 0.03 OrthoFinder output from all 47 species
Solyc06g072010.2.1 Solyc06g072010 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g074950.3.1 Solyc09g074950 ATPase family AAA domain-containing protein FIGL1... 0.03 OrthoFinder output from all 47 species
Spa_g26195 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02908 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e011359_P005 Zm00001e011359 ATPase family AAA domain-containing protein FIGL1... 0.05 OrthoFinder output from all 47 species
Zm00001e021043_P002 Zm00001e021043 ATPase family AAA domain-containing protein FIGL1... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0043484 regulation of RNA splicing IEP HCCA
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP HCCA
BP GO:0050684 regulation of mRNA processing IEP HCCA
BP GO:1903311 regulation of mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR041569 AAA_lid_3 1149 1185
IPR003959 ATPase_AAA_core 996 1125
IPR000253 FHA_dom 163 231
No external refs found!