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  5. Spa_g52122

Spa_g52122 (DRB3)


Aliases : DRB3

Description : regulatory protein *(DRB2) of miRNA biogenesis pathway & original description: none


Gene families : OG0000404 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000404_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g52122

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00199170 DRB3,... Double-stranded RNA-binding protein 2 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
AT3G26932 DRB3 dsRNA-binding protein 3 0.05 OrthoFinder output from all 47 species
Aev_g49346 DRB2 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Als_g46566 DRB1, HYL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08517 DRB3 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene19024.t1 DRB2, Aspi01Gene19024 regulatory protein *(DRB2) of miRNA bioGenesis pathway &... 0.03 OrthoFinder output from all 47 species
Azfi_s0116.g046351 DRB3 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.06 OrthoFinder output from all 47 species
Ceric.19G040500.1 DRB2, Ceric.19G040500 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Ceric.1Z230000.1 DRB2, Ceric.1Z230000 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Ceric.26G039500.1 DRB2, Ceric.26G039500 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Dac_g13517 DRB3 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.05 OrthoFinder output from all 47 species
Ehy_g06079 DRB2 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Gb_18815 DRB2 Double-stranded RNA-binding protein 6 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
LOC_Os09g33460.1 LOC_Os09g33460 Double-stranded RNA-binding protein 5 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
MA_916653g0010 DRB1, HYL1 Double-stranded RNA-binding protein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_98180g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc01g009190.3.1 DRB3, Solyc01g009190 Double-stranded RNA-binding protein 1 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Solyc03g118950.3.1 Solyc03g118950 Double-stranded RNA-binding protein 4 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Spa_g51681 DRB5 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Zm00001e010132_P001 DRB3, Zm00001e010132 Double-stranded RNA-binding protein 5 OS=Oryza sativa... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR014720 dsRBD_dom 143 208
IPR014720 dsRBD_dom 230 293
No external refs found!