Zm00001d047209 (GRMZM2G431243)

Aliases : GRMZM2G431243

Description : 27.3.39 RNA.regulation of transcription.AtSR Transcription Factor family Encodes a putative CAM binding transcription factor. Loss of function mutations show enhanced resistance to fungal and bacterial pathogens suggesting that CAMTA functions to suppress defense responses. signal responsive 1 (SR1)

Gene families : OG_01_0000629 (Gene family) Phylogenetic Tree(s): OG0000629_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d047209
Cluster HCCA cluster: Cluster_320

Target Alias Description ECC score Gene Family Method Actions
AT2G22300 CAMTA3, SR1 signal responsive 1 0.04 Gene family
GSVIVT01004860001 No alias 27.3.39 RNA.regulation of transcription.AtSR... 0.05 Gene family
GSVIVT01010506001 No alias No description available 0.01 Gene family
GSVIVT01017670001 No alias 27.3.39 RNA.regulation of transcription.AtSR... 0.02 Gene family
LOC_Os01g69910 Os01g0923600 30.11 signalling.light Calmodulin-binding transcription... 0.03 Gene family
LOC_Os03g27080 Os03g0388500 17.5.3 hormone... 0.02 Gene family
LOC_Os04g31900 Os04g0388500 30.11 signalling.light Calmodulin-binding transcription... 0.04 Gene family
Solyc01g105230.3.1 Solyc01g105230.3 27.3.39 RNA.regulation of transcription.AtSR... 0.04 Gene family
Solyc04g056270.3.1 Solyc04g056270.3 27.3.39 RNA.regulation of transcription.AtSR... 0.06 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 873 892
IPR000048 IQ_motif_EF-hand-BS 849 868
IPR002909 IPT_dom 443 526
IPR020683 Ankyrin_rpt-contain_dom 647 736
IPR005559 CG-1_dom 22 135
No external refs found!