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  5. Spa_g51583

Spa_g51583 (NFB01, NFB1, MUB3.9, FAS2)


Aliases : NFB01, NFB1, MUB3.9, FAS2

Description : component *(CAF1b/FAS2) of CAF1 histone chaperone complex & original description: none


Gene families : OG0006619 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006619_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g51583

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00116490 NFB01, NFB1,... Chromatin organisation.histone chaperone activities.CAF1... 0.04 OrthoFinder output from all 47 species
Aop_g38719 NFB01, NFB1, MUB3.9, FAS2 component *(CAF1b/FAS2) of CAF1 histone chaperone... 0.02 OrthoFinder output from all 47 species
Aspi01Gene25457.t2 NFB01, NFB1,... component *(CAF1b/FAS2) of CAF1 histone chaperone... 0.04 OrthoFinder output from all 47 species
Ceric.12G028700.1 NFB01, NFB1,... component *(CAF1b/FAS2) of CAF1 histone chaperone... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020629.12 NFB01, NFB1, MUB3.9, FAS2 Chromatin assembly factor 1 subunit FAS2 homolog... 0.03 OrthoFinder output from all 47 species
Dac_g43644 NFB01, NFB1, MUB3.9, FAS2 component *(CAF1b/FAS2) of CAF1 histone chaperone... 0.06 OrthoFinder output from all 47 species
Gb_06025 NFB01, NFB1, MUB3.9, FAS2 component CAF1b/FAS2 of CAF1 histone chaperone complex 0.03 OrthoFinder output from all 47 species
LOC_Os08g01680.1 NFB01, NFB1,... component CAF1b/FAS2 of CAF1 histone chaperone complex 0.06 OrthoFinder output from all 47 species
Len_g36215 NFB01, NFB1, MUB3.9, FAS2 component *(CAF1b/FAS2) of CAF1 histone chaperone... 0.13 OrthoFinder output from all 47 species
MA_6422g0020 NFB01, NFB1, MUB3.9, FAS2 component CAF1b/FAS2 of CAF1 histone chaperone complex 0.14 OrthoFinder output from all 47 species
Mp4g02980.1 NFB01, NFB1, MUB3.9, FAS2 component CAF1b/FAS2 of CAF1 histone chaperone complex 0.12 OrthoFinder output from all 47 species
Nbi_g23632 NFB01, NFB1, MUB3.9, FAS2 component *(CAF1b/FAS2) of CAF1 histone chaperone... 0.11 OrthoFinder output from all 47 species
Zm00001e029144_P001 NFB01, NFB1,... component CAF1b/FAS2 of CAF1 histone chaperone complex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 9 40
IPR001680 WD40_repeat 104 140
IPR001680 WD40_repeat 355 380
IPR001680 WD40_repeat 144 181
No external refs found!